nf-core/viralrecon
Assembly and intrahost/low-frequency variant calling for viral samples
ampliconarticassemblycovid-19covid19illuminalong-read-sequencingmetagenomicsnanoporeontoxford-nanoporesars-cov-2variant-callingviralvirus
This is the development version of the pipeline.
Launch development version https://github.com/nf-core/viralrecon