nf-core/modules
Browse the 2003 modules that are currently available as part of nf-core.
A tool to evaluate variant calling performance by comparing a query VCF against a truth VCF.
A tool to evaluate and merge multiple variant calls into a consensus VCF.
Assembly Based ReAligner for next-generation sequencing data
Screen assemblies for antimicrobial resistance against multiple databases
A NATA accredited tool for reporting the presence of antimicrobial resistance genes in bacterial genomes
ABySS is a de novo sequence assembler intended for short paired-end reads and genomes of all sizes.
Fixes prefixes from AdapterRemoval2 output to make sure no clashing read names are in the output. For use with DeDup.
ADMIXTURE is a program for estimating ancestry in a model-based manner from large autosomal SNP genotype datasets, where the individuals are unrelated (for example, the individuals in a case-control association study).