Newsletter - March 2024
nf-core community newsletter for March 2024
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2 blog posts, 15 pipeline releases, 4 upcoming events.
 1st March 2024 |
Blog posts
nf-core/tools - 2.13.0
Out with the old, in with the new
19 Feb 2024 · by mashehu, mirpedrol, drpatelh, maxulysse
Out with the old, in with the new
19 Feb 2024 · by mashehu, mirpedrol, drpatelh, maxulysse
New pipeline first releases! 🎉
These pipelines just had their very first release.
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nf-core/hadge
v0.1.0 Comprehensive pipeline for donor demultiplexing in single cell |
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nf-core/metatdenovo
v1.0.0 Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses. |
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nf-core/molkart
v1.0.0 A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH) |
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nf-core/readsimulator
v1.0.0 A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data. |
Pipeline releases
Upcoming events
| Training Community Foundational Nextflow Training - March 2024 | 5 Mar 2024 – 6 Mar 2024 |
| An online Community Foundational Nextflow training event | |
| Talk Bytesize: nf-core/metatdenovo | 12 Mar 2024 |
| Danilo Di Leo, Linnéuniversitetet | |
| Hackathon Hackathon - March 2024 (Online) | 18 Mar 2024 – 20 Mar 2024 |
| A virtual hackathon with local sites to develop nf-core together | |
| Talk #animal-genomics: Inaugural Meeting | 17 Apr 2024 |
| Christa Kühn, Friedrich Loeffler Institute | |
In case you missed it
New pipelines & proposals
nf-core/datasync New repo
nf-core/datasync is a system operation pipeline that provides several workflows for handling system operation / automation tasks
nf-core/datasync is a system operation pipeline that provides several workflows for handling system operation / automation tasks
nf-core/tumourevo New repo
Analysis pipeline to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and mutational signature deconvolution)
Analysis pipeline to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and mutational signature deconvolution)
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