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nf-core/mhcquant
Edit

Identify and quantify MHC eluted peptides from mass spectrometry raw data

ddaimmunopeptidomicsmass-spectrometrymhcopenmspeptides
This is the development version of the pipeline.
Launch development version https://github.com/nf-core/mhcquant
  • Introduction
  • Usage
  • Parameters
  • Output
  • Releases
    • 3.1.0
    • 3.0.0
    • 2.6.0
    • 2.5.0
    • 2.4.1
    • 2.4.0
    • 2.3.1
    • 2.3.0
    • 2.2.0
    • 2.1.0
    • 2.0.0
    • 1.6.0
    • 1.5.1
    • 1.5
    • 1.4
    • 1.3
    • 1.2.6
    • 1.2.5
    • 1.2.4
    • 1.2.3
    • 1.2.2
    • 1.2.1
    • 1.2.0
    • 1.1.0
    • 1.0.0
    • dev
Introduction Usage Parameters Output Releases
  • 3.1.0
  • 3.0.0
  • 2.6.0
  • 2.5.0
  • 2.4.1
  • 2.4.0
  • 2.3.1
  • 2.3.0
  • 2.2.0
  • 2.1.0
  • 2.0.0
  • 1.6.0
  • 1.5.1
  • 1.5
  • 1.4
  • 1.3
  • 1.2.6
  • 1.2.5
  • 1.2.4
  • 1.2.3
  • 1.2.2
  • 1.2.1
  • 1.2.0
  • 1.1.0
  • 1.0.0
  • dev
run with
See the docs on how to configure the Seqera Platform CLI.
  • nf-core
  • Nextflow
  • Seqera Platform
video introduction
Play
subscribers
100
stars
44
open issues
15
open PRs
2
last release
about 1 month ago
last update
about 1 month ago
included modules
gunzipmultiqcopenms_decoydatabaseopenms_filefilteropenms_idfilter and 7 more modules
included subworkflows
utils_nextflow_pipelineutils_nfcore_pipelineutils_nfschema_plugin
contributors
Github user marissaDubbelaar
Github user jonasscheid
Github user Leon-Bichmann
Github user Zethson
Github user apeltzer
Github user JuliaGraf
Github user janaHoffmann1
Github user steffenlem
Github user SusiJo
Github user ggabernet
Github user Copilot
Github user WackerO
Github user ewels
Github user maxulysse
Github user lkuchenb
Github user sven1103
Github user fu
Github user KevinMenden
get help
Ask a question on Slack Open an issue on GitHub

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