nf-core/hadge
Comprehensive pipeline for donor demultiplexing in single cell
cell-hashingdeconvolutiondemultiplexingdonor-assignmentdonor-deconvolutiongenetic-demultiplexinggenotype-deconvolutionhashing-deconvolutionhashtag-oligonucleotideshtosingle-cell
Version history
First stable release of nf-core/hadge, combining 11 hashing- and genotype-based deconvolution methods (vireo, demuxlet, freemuxlet, souporcell, htodemux, multiseq, bff, demuxem, gmm-demux, hasheddrops, hashsolo) with donor matching to recover discarded cells.
This is a release to ensure that we have a zenodo DOI. Proper release notes will be added to subsequent releases
run with
subscribers
2
stars
26
open issues
12
open PRs
1
last release
3 days ago
last update
3 days ago