Newsletter - March 2022
nf-core community newsletter for March 2022
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1 pipeline release, 7 upcoming events.
 1st March 2022 |
Pipeline releases
Upcoming events
| Talk Bytesize 35: Troubleshooting a failed pipeline | 1 Mar 2022 |
| Phil Ewels - National Genomics Infrastructure / SciLifeLab, Sweden | |
| Talk Bytesize 36: Customising your MultiQC reports | 8 Mar 2022 |
| Phil Ewels - National Genomics Infrastructure / SciLifeLab, Sweden | |
| Talk Bytesize 37: Gather Town | 15 Mar 2022 |
| James A. Fellows Yates - Leibniz-HKI / MPI-EVA | |
| Hackathon Hackathon - March 2022 | 16 Mar 2022 – 18 Mar 2022 |
| A virtual online hackathon to develop nf-core together | |
| Talk Bytesize 40: Software packaging | 5 Apr 2022 |
| Alexander Peltzer - Boehringer Ingelheim Pharma GmbH & Co. KG, Germany | |
| Talk EuroFAANG Training Workshop | 7 Apr 2022 |
| Best practice for preparing pipelines in nf-core and recording pipeline usage in FAANG submissions | |
| Talk Bytesize 41: Code linting tools | 12 Apr 2022 |
| Phil Ewels - National Genomics Infrastructure / SciLifeLab, Sweden | |
In case you missed it
New pipelines & proposals
nf-core/genomeannotator New repo
Pipeline for the identification of (coding) gene structures in draft genomes.
Pipeline for the identification of (coding) gene structures in draft genomes.
nf-core/spatialvi New repo
Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.
Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.
nf-core/taxprofiler New repo
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
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