modules/rclone_check

Check that files in source and destination paths match

checkchecksumcloudsync

https://github.com/nf-core/modules/[...]/modules/nf-core/rclone/check

Description

Check that files in source and destination paths match

Input

name:type

description

pattern

`meta`
`:map`

Groovy Map containing source information e.g. [ id:‘test’ ]

`source`
`:file`

File or directory containing source files to compare.

`destination`
`:file`

File or directory containing destination files to compare.

Output

name:type

description

pattern

`combined`

`meta`
`:map`

Groovy Map containing source information e.g. [ id:‘test’ ]

`${prefix}.combined.txt`
`:file`

Combined report of matching, missing, differing, and error paths.

*.combined.txt

`differ`

`meta`
`:map`

Groovy Map containing source information e.g. [ id:‘test’ ]

`${prefix}.differ.txt`
`:file`

Report of paths present in both source and destination but different.

*.differ.txt

`missing_on_dst`

`meta`
`:map`

Groovy Map containing source information e.g. [ id:‘test’ ]

`${prefix}.missing_on_dst.txt`
`:file`

Report of paths present in source but missing from destination.

*.missing_on_dst.txt

`missing_on_src`

`meta`
`:map`

Groovy Map containing source information e.g. [ id:‘test’ ]

`${prefix}.missing_on_src.txt`
`:file`

Report of paths present in destination but missing from source.

*.missing_on_src.txt

`match`

`meta`
`:map`

Groovy Map containing source information e.g. [ id:‘test’ ]

`${prefix}.match.txt`
`:file`

Report of matching paths.

*.match.txt

`error`

`meta`
`:map`

Groovy Map containing source information e.g. [ id:‘test’ ]

`${prefix}.error.txt`
`:file`

Report of paths with read or hash errors.

*.error.txt

`versions_rclone`

`${task.process}`
`:string`

The name of the process

`rclone`
`:string`

The name of the tool

`rclone --version | sed -n '1s/^rclone v//p'`
`:eval`

The expression to obtain the version of the tool

Topics

name:type

description

pattern

`versions`

`${task.process}`
`:string`

The name of the process

`rclone`
`:string`

The name of the tool

`rclone --version | sed -n '1s/^rclone v//p'`
`:eval`

The expression to obtain the version of the tool

Tools

rclone
MIT

Rclone is a command-line program to manage files on cloud storage.

rclone.org rclone.org/commands/rclone_check https://github.com/rclone/rclone

modules/rclone_check

Description

Input

`meta`
`:map`

`source`
`:file`

`destination`
`:file`

Output

`combined`

`meta`
`:map`

`${prefix}.combined.txt`
`:file`

`differ`

`meta`
`:map`

`${prefix}.differ.txt`
`:file`

`missing_on_dst`

`meta`
`:map`

`${prefix}.missing_on_dst.txt`
`:file`

`missing_on_src`

`meta`
`:map`

`${prefix}.missing_on_src.txt`
`:file`

`match`

`meta`
`:map`

`${prefix}.match.txt`
`:file`

`error`

`meta`
`:map`

`${prefix}.error.txt`
`:file`

`versions_rclone`

`${task.process}`
`:string`

`rclone`
`:string`

`rclone --version | sed -n '1s/^rclone v//p'`
`:eval`

Topics

`versions`

`${task.process}`
`:string`

`rclone`
`:string`

`rclone --version | sed -n '1s/^rclone v//p'`
`:eval`

Tools

rclone
MIT

included in

maintainer

get in touch

modules/rclone_check

Description

Input

meta :map

source :file

destination :file

Output

combined

meta :map

${prefix}.combined.txt :file

differ

meta :map

${prefix}.differ.txt :file

missing_on_dst

meta :map

${prefix}.missing_on_dst.txt :file

missing_on_src

meta :map

${prefix}.missing_on_src.txt :file

match

meta :map

${prefix}.match.txt :file

error

meta :map

${prefix}.error.txt :file

versions_rclone

${task.process} :string

rclone :string

rclone --version | sed -n '1s/^rclone v//p' :eval

Topics

versions

${task.process} :string

rclone :string

rclone --version | sed -n '1s/^rclone v//p' :eval

Tools

rcloneMIT

included in

maintainer

get in touch

`meta`
`:map`

`source`
`:file`

`destination`
`:file`

`combined`

`meta`
`:map`

`${prefix}.combined.txt`
`:file`

`differ`

`meta`
`:map`

`${prefix}.differ.txt`
`:file`

`missing_on_dst`

`meta`
`:map`

`${prefix}.missing_on_dst.txt`
`:file`

`missing_on_src`

`meta`
`:map`

`${prefix}.missing_on_src.txt`
`:file`

`match`

`meta`
`:map`

`${prefix}.match.txt`
`:file`

`error`

`meta`
`:map`

`${prefix}.error.txt`
`:file`

`versions_rclone`

`${task.process}`
`:string`

`rclone`
`:string`

`rclone --version | sed -n '1s/^rclone v//p'`
`:eval`

`versions`

`${task.process}`
`:string`

`rclone`
`:string`

`rclone --version | sed -n '1s/^rclone v//p'`
`:eval`

rclone
MIT