Download MacSyFinder models using msf_data
model_name
:string
Name of the MacSyFinder model to download (e.g., ‘TXSScan’, ‘CasFinder’)
models
:directory
Directory containing downloaded MacSyFinder model definitions
versions_macsyfinder
${task.process}
The name of the process
macsyfinder
The name of the tool
macsyfinder --version 2>&1 | sed "1!d;s/^.*MacSyFinder //;s/ .*$//"
:eval
The expression to obtain the version of the tool
versions_macsydata
msf_data
msf_data --version 2>&1 | sed "4!d;s/^- MacSyLib //;s/ *$//"
versions
Detection of macromolecular systems in protein datasets using systems modelling and similarity search
