nf-core/newsletter, December 2024

Blog posts

• Maintainers Minutes: November 2024 — Keeping you informed of the latest maintainers discussions
  29 Nov 2024 · by jfy133, sateeshperi

  

New pipeline first releases 🎉

These pipelines just had their very first release.

• nf-core/metapep v1.0.0 — From metagenomes to epitopes and beyond

Pipeline releases

• nf-core/ampliseq v2.12.0 (15 Nov 2024)
• nf-core/bacass v2.4.0 (18 Nov 2024)
• nf-core/crisprseq v2.3.0 (8 Nov 2024)
• nf-core/demultiplex v1.5.3 (6 Nov 2024)
• nf-core/denovotranscript v1.1.0 (29 Nov 2024)
• nf-core/detaxizer v1.1.0 (8 Nov 2024)
• nf-core/taxprofiler v1.2.1 (28 Nov 2024)

Upcoming events

• Talk #animal-genomics: December Meeting — 18 Dec 2024
  Emily Clark (The Roslin Institute, University of Edinburgh, UK)
• Talk Bytesize: Content Addressable Data Storage — 14 Jan 2025
  Rob Syme, Seqera
• Talk #regulatory - monthly meeting — 21 Jan 2025
  Round table in regulatory led by Alex Peltzer (Boehringer Ingelheim Pharma GmbH)
• Talk #animal-genomics: January Meeting — 22 Jan 2025
  ELIXIR Domestic Animals Genome & Phenome Focus Group white paper section round table
• Talk Bytesize: using JSON schema in Nextflow pipelines — 28 Jan 2025
  Nicolas Vannieuwkerke, Center for Medical Genetics Ghent

In case you missed it

Recent events

• Bytesize: Special Interest Group - Animal Genomics — 12 Nov 2024 (Talk )
• #regulatory - monthly meeting — 12 Nov 2024 (Talk )
• CANCELLED: #animal-genomics: November Meeting — 20 Nov 2024 (Talk )

Earlier blog posts

• Announcing: Weekly Helpdesk — 28 Oct 2024
• Maintainers Minutes: September/October 2024 — 28 Oct 2024
• nf-core/tools - 3.0.0 — 7 Oct 2024
• Migration from Biocontainers to Seqera Containers: Part 2 — 2 Oct 2024
• Migration from Biocontainers to Seqera Containers: Part 1 — 17 Sept 2024

New pipelines & proposals

New pipeline repositories

• nf-core/proteinfamilies — Generation and updating of protein families