nf-core Newsletter

Blog posts

nf-core/sarek paper — Harder, Better, Faster, Stronger
24 Apr 2024 · by FriederikeHanssen, maxulysse
March 2024 Hackathon — The distributed / online global hackathon
7 Apr 2024 · by ewels
Special Interest Groups — A new place to collaborate with others working in your field
2 Apr 2024 · by ewels

These pipelines just had their very first release.

nf-core/riboseq v1.0.0, v1.0.1 — Pipeline for the analysis of ribosome profiling, or Ribo-seq (also named ribosome footprinting) data.

nf-core/airrflow v3.3.0, v4.0 (23 Apr 2024)
nf-core/ampliseq v2.9.0 (3 Apr 2024)
nf-core/bacass v2.2.0 (17 Apr 2024)
nf-core/metaboigniter v2.0.1 (15 Apr 2024)
nf-core/metatdenovo v1.0.1 (3 Apr 2024)
nf-core/readsimulator v1.0.1 (26 Apr 2024)
nf-core/rnafusion v3.0.2 (10 Apr 2024)
nf-core/sarek v3.4.1 (22 Apr 2024)
nf-core/smrnaseq v2.3.1 (18 Apr 2024)
nf-core/taxprofiler v1.1.6, v1.1.7 (29 Apr 2024)

Talk Bytesize: Resolving merge conflicts after a tools release — 14 May 2024
Kübra Narci, GHGA/DKFZ
Talk #animal-genomics: May Meeting — 15 May 2024
Alessandro Bagnato, Department of Veterinary Medicine, University of Milan, Italy
Hackathon Hackathon - May 2024 (Boston) — 21 May 2024 – 22 May 2024
An in-person hackathon held in Boston
Talk Bytesize: Get your containers with "Nextflow inspect" — 28 May 2024
Phil Ewels, Seqera
Talk Bytesize: Explaining Wave containers — 11 Jun 2024
Phil Ewels, Seqera
Talk #animal-genomics: June Meeting — 19 Jun 2024
Yuliaxis Ramayo, Institute of Agrifood Research and Technology (IRTA), Spain
Talk Bytesize: Containers for HPC with Singularity — 25 Jun 2024
Marco Claudio De La Pierre, Seqera

nf-core/drop — Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders