nf-core/newsletter, April 2024
7 pipeline releases, 5 upcoming events.
View on the nf-core website
New pipeline first releases 🎉
These pipelines just had their very first release.
- nf-core/detaxizer v1.0.0 — A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxon to identify (and remove) is Homo sapiens. Removal is optional.
In case you missed it
Recent events
Earlier blog posts
New pipelines & proposals
New pipeline repositories
- nf-core/deepmodeloptim (in development) — Stochastic Testing and Input Manipulation for Unbiased Learning Systems
- nf-core/seqinspector — Dedicated QC-only pipeline for sequencing data. The pipeline will run a (potentially large) set of QC tools and can output global and group specific Multiqc reports. The pipeline is targeting core facilities or research groups with larger sequencing throughput.
- nf-core/spatialaxe — A bioinformatics best-practice processing and quality control pipeline for Xenium and Artera data
- nf-core/tfactivity (in development) — Bioinformatics pipeline that makes use of expression and open chromatin data to identify differentially active transcription factors across conditions.
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