# nf-core/newsletter, November 2023

15 pipeline releases, 5 upcoming events.

[View on the nf-core website](https://nf-co.re/newsletter/2023/11)

## New pipeline first releases 🎉

These pipelines just had their very first release.

- [nf-core/pixelator](https://nf-co.re/pixelator) v1.0.0, v1.0.1 — Pipeline to generate Proximity Network Assay data with Pixelator (Pixelgen Technologies AB)
- [nf-core/rnasplice](https://nf-co.re/rnasplice) v1.0.0 — rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis

## Pipeline releases

- [nf-core/airrflow](https://nf-co.re/airrflow) v3.2.0 _(27 Oct 2023)_
- [nf-core/ampliseq](https://nf-co.re/ampliseq) v2.7.0 _(19 Oct 2023)_
- [nf-core/bacass](https://nf-co.re/bacass) v2.1.0 _(24 Oct 2023)_
- [nf-core/bamtofastq](https://nf-co.re/bamtofastq) v2.1.0 _(6 Oct 2023)_
- [nf-core/cutandrun](https://nf-co.re/cutandrun) v3.2.1 _(25 Oct 2023)_
- [nf-core/differentialabundance](https://nf-co.re/differentialabundance) v1.3.0, v1.3.1 _(27 Oct 2023)_
- [nf-core/fetchngs](https://nf-co.re/fetchngs) v1.10.1, v1.11.0 _(18 Oct 2023)_
- [nf-core/mag](https://nf-co.re/mag) v2.5.0 _(10 Oct 2023)_
- [nf-core/methylseq](https://nf-co.re/methylseq) v2.5.0 _(18 Oct 2023)_
- [nf-core/mhcquant](https://nf-co.re/mhcquant) v2.5.0 _(10 Oct 2023)_
- [nf-core/sarek](https://nf-co.re/sarek) v3.3.2 _(4 Oct 2023)_
- [nf-core/scrnaseq](https://nf-co.re/scrnaseq) v2.4.1 _(2 Oct 2023)_
- [nf-core/taxprofiler](https://nf-co.re/taxprofiler) v1.1.1, v1.1.2 _(27 Oct 2023)_

## Upcoming events

- **Talk** [Bytesize: nf-core/pangenome](https://nf-co.re/events/2023/bytesize_pangenome) — 7 Nov 2023
  Simon Heumos, QBiC, University of Tübingen
- **Talk** [Bytesize: The Art of a Minimal Example](https://nf-co.re/events/2023/bytesize_minimal_example) — 14 Nov 2023
  Phil Ewels (Seqera)
- **Hackathon** [Hackathon - November 2023 (Boston)](https://nf-co.re/events/2023/hackathon-november-2023) — 28 Nov 2023 – 29 Nov 2023
  An in-person hackathon held in Boston
- **Talk** [Nextflow Symposium 2023](https://nf-co.re/events/2023/symposium_wgc_dec23) — 4 Dec 2023
  A hybrid symposium held on Wellcome Genome Campus in Cambridge and online
- **Talk** [Bytesize: git concepts](https://nf-co.re/events/2023/bytesize_git_concepts) — 12 Dec 2023
  Edmund Miller, The University of Texas at Dallas

## In case you missed it

### Recent events

- [Bytesize: The new nf-core website](https://nf-co.re/events/2023/bytesize_website) — 3 Oct 2023 (Talk)
- [Bytesize: Using nf-core configs in custom pipelines](https://nf-co.re/events/2023/bytesize_custom_configs) — 10 Oct 2023 (Talk)
- [Nextflow in Action](https://nf-co.re/events/2023/talk_nextflow_in_action) — 12 Oct 2023 (Talk)
- [Hackathon - October 2023 (Barcelona)](https://nf-co.re/events/2023/hackathon-october-2023) — 16 Oct 2023 – 18 Oct 2023 (Hackathon)
- [Bytesize: nf-core/viralintegration](https://nf-co.re/events/2023/bytesize_viralintegration) — 24 Oct 2023 (Talk)
- [Bytesize: Converting pytest modules to nf-test](https://nf-co.re/events/2023/bytesize_converting_pytest_modules_to_nf-test) — 31 Oct 2023 (Talk)

## New pipelines & proposals

### New pipeline repositories

- [nf-core/createtaxdb](https://nf-co.re/createtaxdb) — Parallelised and automated construction of metagenomic classifier databases of different tools
- [nf-core/detaxizer](https://nf-co.re/detaxizer) — A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxon to identify (and remove) is Homo sapiens. Removal is optional.
- [nf-core/rangeland](https://nf-co.re/rangeland) — Pipeline for remotely sensed imagery. The pipeline processes satellite imagery alongside auxiliary data in multiple steps to arrive at a set of trend files related to land-cover changes.
- [nf-core/riboseq](https://nf-co.re/riboseq) — Pipeline for the analysis of ribosome profiling, or Ribo-seq (also named ribosome footprinting) data.

---

This newsletter is brought to you by the [nf-core](https://nf-co.re) community.