# nf-core/newsletter, September 2023

5 pipeline releases, 12 upcoming events.

[View on the nf-core website](https://nf-co.re/newsletter/2023/09)

## New pipeline first releases 🎉

These pipelines just had their very first release.

- [nf-core/pangenome](https://nf-co.re/pangenome) v1.0.0 — Renders a collection of sequences into a pangenome graph. https://doi.org/10.1093/bioinformatics/btae609.

## Pipeline releases

- [nf-core/atacseq](https://nf-co.re/atacseq) v2.1.2 _(7 Aug 2023)_
- [nf-core/cutandrun](https://nf-co.re/cutandrun) v3.2 _(31 Aug 2023)_
- [nf-core/funcscan](https://nf-co.re/funcscan) v1.1.3 _(11 Aug 2023)_
- [nf-core/scrnaseq](https://nf-co.re/scrnaseq) v2.4.0 _(24 Aug 2023)_

## Upcoming events

- **Talk** [Bytesize: Setting up a gitpod environment](https://nf-co.re/events/2023/bytesize_gitpod) — 5 Sept 2023
  Marcel Ribeiro-Dantas, Seqera Labs
- **Training** [Community Foundational Nextflow Training - September 2023](https://nf-co.re/events/2023/training-basic-2023) — 6 Sept 2023 – 8 Sept 2023
  The primary Nextflow / nf-core training for beginners, with 3 x 2.5 hour sessions.
- **Talk** [Bytesize: A beginners guide to nf-core](https://nf-co.re/events/2023/bytesize_beginners_guide) — 12 Sept 2023
  Franziska Bonath, National Genomics Infrastructure, Stockholm
- **Talk** [Bytesize: Using Wave Containers](https://nf-co.re/events/2023/bytesize_wave_containers) — 19 Sept 2023
  Marcel Ribeiro-Dantas, Seqera Labs
- **Training** [Hands-on Nextflow Training - September 2023](https://nf-co.re/events/2023/training-hands-on-2023) — 20 Sept 2023
  A fast way to get up and running with Nextflow - hands on and light on theory. One 2 hour session.
- **Training** [Community Advanced Nextflow Training - September 2023](https://nf-co.re/events/2023/training-sept-2023) — 27 Sept 2023 – 28 Sept 2023
  Join us for the first ever Advanced community training! Become a Nextflow expert!
- **Talk** [Bytesize: The new nf-core website](https://nf-co.re/events/2023/bytesize_website) — 3 Oct 2023
  Matthias Hörtenhuber, Scilifelab Data Center
- **Talk** [Bytesize: Using nf-core configs in custom pipelines](https://nf-co.re/events/2023/bytesize_custom_configs) — 10 Oct 2023
  Judith Ballesteros, Max Planck Institute for evolutionary anthropology
- **Talk** [Nextflow in Action](https://nf-co.re/events/2023/talk_nextflow_in_action) — 12 Oct 2023
  Tree of Life, Wellcome Sanger Institute and Genomics England
- **Hackathon** [Hackathon - October 2023 (Barcelona)](https://nf-co.re/events/2023/hackathon-october-2023) — 16 Oct 2023 – 18 Oct 2023
  A hybrid hackathon held in Barcelona and online
- **Talk** [Bytesize: nf-core/viralintegration](https://nf-co.re/events/2023/bytesize_viralintegration) — 24 Oct 2023
  Alyssa Briggs, The University of Texas at Dallas
- **Talk** [Bytesize: Converting pytest modules to nf-test](https://nf-co.re/events/2023/bytesize_converting_pytest_modules_to_nf-test) — 31 Oct 2023
  Adam Talbot (Seqera) and Sateesh Peri (MemVerge)

## New pipelines & proposals

### New pipeline repositories

- [nf-core/diseasemodulediscovery](https://nf-co.re/diseasemodulediscovery) _(in development)_ — A pipeline for network-based disease module identification.
- [nf-core/drugresponseeval](https://nf-co.re/drugresponseeval) — Pipeline for testing drug response prediction models in a statistically and biologically sound way.

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