# nf-core/newsletter, April 2023

15 pipeline releases, 7 upcoming events.

[View on the nf-core website](https://nf-co.re/newsletter/2023/04)

## New pipeline first releases 🎉

These pipelines just had their very first release.

- [nf-core/taxprofiler](https://nf-co.re/taxprofiler) v1.0.0 — Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
- [nf-core/viralintegration](https://nf-co.re/viralintegration) v0.1.0 — Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.

## Pipeline releases

- [nf-core/airrflow](https://nf-co.re/airrflow) v3.0 _(20 Mar 2023)_
- [nf-core/ampliseq](https://nf-co.re/ampliseq) v2.5.0 _(2 Mar 2023)_
- [nf-core/circdna](https://nf-co.re/circdna) v1.0.2 _(9 Mar 2023)_
- [nf-core/cutandrun](https://nf-co.re/cutandrun) v3.1 _(10 Mar 2023)_
- [nf-core/differentialabundance](https://nf-co.re/differentialabundance) v1.1.1 _(3 Mar 2023)_
- [nf-core/epitopeprediction](https://nf-co.re/epitopeprediction) v2.2.0, v2.2.1 _(17 Mar 2023)_
- [nf-core/isoseq](https://nf-co.re/isoseq) v1.1.3, v1.1.4 _(13 Mar 2023)_
- [nf-core/mag](https://nf-co.re/mag) v2.3.0 _(2 Mar 2023)_
- [nf-core/nanoseq](https://nf-co.re/nanoseq) v3.1.0 _(10 Mar 2023)_
- [nf-core/rnafusion](https://nf-co.re/rnafusion) v2.2.0 _(13 Mar 2023)_
- [nf-core/rnaseq](https://nf-co.re/rnaseq) v3.11.0, v3.11.1 _(31 Mar 2023)_
- [nf-core/scrnaseq](https://nf-co.re/scrnaseq) v2.2.0 _(20 Mar 2023)_
- [nf-core/viralrecon](https://nf-co.re/viralrecon) v2.6.0 _(23 Mar 2023)_

## Upcoming events

- **Talk** [Bytesize: HackMD and reveal.js](https://nf-co.re/events/2023/bytesize_hackmd_reveal_js) — 18 Apr 2023
  Maxime Garcia, Seqera Labs
- **Talk** [Bytesize: training translations](https://nf-co.re/events/2023/bytesize_translations) — 25 Apr 2023
  Marcel Ribeiro-Dantas, Seqera Labs
- **Talk** [Bytesize: Converting Python scripts into packages for PyPI, Bioconda & Biocontainers](https://nf-co.re/events/2023/bytesize_python_packaging) — 2 May 2023
  Phil Ewels - Seqera Labs
- **Talk** [Bytesize: Experiences in the nf-core Mentoring Program](https://nf-co.re/events/2023/bytesize_mentoring) — 9 May 2023
  Mariana Guilardi (Federal University of Sao Paulo, UNIFESP) and Alyssa Briggs (The University of Texas at Dallas)
- **Talk** [Bytesize: nf-core community survey 2023](https://nf-co.re/events/2023/bytesize_survey_2023) — 16 May 2023
  Christopher Hakkaart - Seqera Labs
- **Talk** [Bytesize: Workflow safety and immutable objects](https://nf-co.re/events/2023/bytesize_workflow_safety) — 23 May 2023
  Rob Syme, Seqera Labs
- **Talk** [Bytesize: nf-core/quantms](https://nf-co.re/events/2023/bytesize_quantms) — 30 May 2023
  Julianus Pfeuffer (Zuse Institute Berlin) and Yasset Perez Riverol (EMBL-EBI)

## In case you missed it

### Recent events

- [Bytesize: nf-core modules patch](https://nf-co.re/events/2023/bytesize_modules_patch) — 7 Mar 2023 (Talk)
- [nf-core Training - March 2023](https://nf-co.re/events/2023/training-march-2023) — 13 Mar 2023 – 16 Mar 2023 (Training)
- [Bytesize: nf-core/hgtseq](https://nf-co.re/events/2023/bytesize_hgtseq) — 21 Mar 2023 (Talk)
- [Hackathon - March 2023 (Online)](https://nf-co.re/events/2023/hackathon-march-2023) — 27 Mar 2023 – 29 Mar 2023 (Hackathon)

### Earlier advisories

- **LOW** [Trimming parameters ignored in RNA-seq pipeline 3.10](https://nf-co.re/advisories/rnaseq-trimming-parameters-ignored) — 13 Jan 2023

## New pipelines & proposals

### New pipeline repositories

- [nf-core/spinningjenny](https://nf-co.re/spinningjenny) _(in development)_ — Pipeline for simulating the first industrial revolution using Agent Based Models.

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