nf-core/newsletter, December 2022

Pipeline releases

• nf-core/atacseq v2.0 (30 Nov 2022)
• nf-core/coproid v1.1.1 (4 Nov 2022)
• nf-core/eager v2.4.6 (17 Nov 2022)
• nf-core/fetchngs v1.8 (8 Nov 2022)
• nf-core/methylseq v2.0.0, v2.1.0, v2.2.0 (28 Nov 2022)
• nf-core/sarek v3.1, v3.1.1 (21 Nov 2022)

Upcoming events

• Talk Bytesize: nf-test — 6 Dec 2022
  Edmund Miller, University of Texas at Dallas
• Talk Bytesize: nf-core/taxprofiler — 17 Jan 2023
  Sofia Stamouli, Karolinska Institutet
• Talk Bytesize: nf-core/funcscan — 24 Jan 2023
  Jasmin Frangenberg - Dept. Palaeobiotechnology, Leibniz Institute for Natural Product Research and Infection Biology Hans Knöll Institute
• Talk Bytesize: transcripts of bytesize talks — 31 Jan 2023
  Franziska Bonath - NGI, Stockholm

In case you missed it

Recent events

• Bytesize: nf-core/nascent — 1 Nov 2022 (Talk )
• Bytesize: Configuring lint tests — 8 Nov 2022 (Talk )
• Bytesize: using custom scripts in Nextflow pipelines — 15 Nov 2022 (Talk )
• Bytesize: Subworkflows — 22 Nov 2022 (Talk )
• Bytesize: Working with GitHub using VSCode and Github CLI — 29 Nov 2022 (Talk )

New pipelines & proposals

New pipeline repositories

• nf-core/radseq (in development) — Variant-calling pipeline for Restriction site-associated DNA sequencing (RADseq).