nf-core/newsletter, August 2022

Pipeline releases

• nf-core/fetchngs v1.7 (1 Jul 2022)
• nf-core/isoseq v1.1.0 (12 Jul 2022)
• nf-core/rnafusion v2.1.0 (12 Jul 2022)
• nf-core/sarek v3.0 (21 Jul 2022)
• nf-core/viralrecon v2.5 (13 Jul 2022)

Upcoming events

• Talk Bytesize: nf-core/rnafusion — 13 Sept 2022
  Annick Renevey - Karolinska Institutet
• Talk Bytesize: nf-core/proteinfold — 20 Sept 2022
  Athanasios Baltzis - Centre for Genomic Regulation, Barcelona
• Talk Bytesize: community updates Sep 2022 — 27 Sept 2022
  Phil Ewels

In case you missed it

Recent events

• Bytesize: DSL2 Coding style recommendations (Part 1) — 5 Jul 2022 (Talk )
• Bytesize: nf-core/inkscape and tube map diagrams — 12 Jul 2022 (Talk )
• Bytesize: Bactopia & using nf-core components in non-nf-core pipelines — 19 Jul 2022 (Talk )
• Bytesize: nf-core/chipseq — 26 Jul 2022 (Talk )

New pipelines & proposals

New pipeline repositories

• nf-core/crisprseq — A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as the discovery of important genes from knock-out or activation CRISPR-Cas9 screens using CRISPR pooled DNA (`screening`).