nf-core/newsletter, May 2021

New pipeline first releases 🎉

These pipelines just had their very first release.

• nf-core/clipseq v1.0.0 — CLIP sequencing analysis pipeline for QC, pre-mapping, genome mapping, UMI deduplication, and multiple peak-calling options.
• nf-core/proteogenomicsdb v1.0.0 — The ProteoGenomics database generation workflow creates different protein databases for ProteoGenomics data analysis.

Pipeline releases

• nf-core/bamtofastq v1.1.0 (22 Apr 2021)
• nf-core/chipseq v1.2.2 (22 Apr 2021)
• nf-core/diaproteomics v1.2.3, v1.2.4 (29 Apr 2021)
• nf-core/eager v2.3.3 (8 Apr 2021)

Upcoming events

• Talk Bytesize 11: Development environments & workflows — 4 May 2021
  Phil Ewels - SciLifeLab, Sweden
• Talk Bytesize 12: Template sync - how to merge automated PRs — 11 May 2021
  Phil Ewels - SciLifeLab, Sweden
• Talk Bytesize 13: Tuning pipeline performance — 18 May 2021
  Gisela Gabernet - QBiC Tübingen, Germany
• Talk Bytesize 14: Graphic design / pipeline diagrams — 25 May 2021
  Zandra Fagernäs - MPI-SHH
• Talk Bytesize 15: Pipeline first release — 1 Jun 2021
  Alexander Peltzer - Boehringer Ingelheim Pharma GmbH & Co. KG, Germany
• Talk Bytesize 16: Modules test data — 8 Jun 2021
  Kevin Menden - QBiC Tübingen, Germany
• Talk Bytesize 17: Pytest workflow — 15 Jun 2021
  Edmund Miller - University of Texas at Dallas
• Talk Bytesize 18: Development environments & workflows II — 22 Jun 2021
  Maxime Garcia - SciLifeLab / Karolinska Institutet, Sweden

In case you missed it

Recent events

• Bytesize 8: Running pipelines offline — 13 Apr 2021 (Talk )
• Bytesize 9: JSON-schema: What, why and how — 20 Apr 2021 (Talk )
• Seqera Labs Cloud Webinar Series - Nextflow on Azure Batch — 22 Apr 2021 (Talk )
• Bytesize 10: Making a new institutional profile — 27 Apr 2021 (Talk )