nf-core/newsletter, April 2020

New pipeline first releases 🎉

These pipelines just had their very first release.

• nf-core/nanoseq v1.0.0 — Nanopore demultiplexing, QC and alignment pipeline

Pipeline releases

• nf-core/eager v2.1.0 (5 Mar 2020)
• nf-core/mhcquant v1.4 (23 Mar 2020)

In case you missed it

Recent events

• Hackathon @ The Crick — 4 Mar 2020 – 6 Mar 2020 (Hackathon )

New pipelines & proposals

New pipeline repositories

• nf-core/demultiplex — Demultiplexing pipeline for sequencing data
• nf-core/metaboigniter — Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
• nf-core/viralrecon — Assembly and intrahost/low-frequency variant calling for viral samples